Insertion junction: LMJ.RY0402.181781_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.181781
Chromosome:chromosome 8
Location:4375258
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g381800 (1 of 2) 5.3.3.2 - Isopentenyl-diphosphate Delta-isomerase / Methylbutenylpyrophosphate isomerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACTCCACACCGCATCCCAACGCCCAGCA
Internal bar code:GGCCCGGTGTTTCAAACAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:88.6536
LEAP-Seq n confirming:107113
LEAP-Seq n nonconfirming:13709
LEAP-Seq n unique pos:148

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACATGCCTCACTGCCTG
Suggested primer 2:GTGTGTGTGTGTGTGCGTGT