Insertion junction: LMJ.RY0402.181805_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.181805
Chromosome:chromosome 9
Location:1523038
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g397900 (1 of 1) PTHR21347:SF0 - CLEFT LIP AND PALATE TRANSMEMBRANE PROTEIN 1 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACCTCTCTAACACCCATTCTGCCGACG
Internal bar code:TTATCGCTTCGGGGTCCCGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1181
LEAP-Seq percent confirming:99.3562
LEAP-Seq n confirming:1852
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGAGTTTAGAGCAGTTGG
Suggested primer 2:TCTGCACCCTCTCTCCACTT