Insertion junction: LMJ.RY0402.181942_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.181942
Chromosome:chromosome 2
Location:1782488
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g086750 (1 of 1) PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGGACTTCTCCTTCTTCTCCTTCTTTCC
Internal bar code:TAGTCCCCCCCCCGTGGTCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:156
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAGTCTCATGCTACAAA
Suggested primer 2:TCGACGAAGGAAAAGAAGGA