Insertion junction: LMJ.RY0402.181942_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.181942
Chromosome:chromosome 2
Location:1782562
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre02.g086750 (1 of 1) PTHR12709:SF5 - DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA43 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGAGCCCTCATGATTACAGCATCGCCTC
Internal bar code:TAGTCCCCCCCCGTGGTCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:99.8596
LEAP-Seq n confirming:711
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCAGTCTCATGCTACAAA
Suggested primer 2:GGCCAAGAAAAAGGAAAAGG