Insertion junction: LMJ.RY0402.182007_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.182007
Chromosome:chromosome 16
Location:2612182
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g661700 (1 of 1) PTHR31775//PTHR31775:SF2 - FAMILY NOT NAMED // REMORIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACCCTCCCTTCATGATGCCGGCGTACAC
Internal bar code:GGTCGCACGTCTTGGCGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:732
LEAP-Seq percent confirming:99.7823
LEAP-Seq n confirming:5041
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTCCAGCTATCAAGCAA
Suggested primer 2:GTTCTGGCTCAAGGTCAAGG