Insertion junction: LMJ.RY0402.182148_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182148
Chromosome:chromosome 6
Location:1195483
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g257600 FA1 (1 of 4) PF13516 - Leucine Rich repeat (LRR_6); Flagellar Autonomy Protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGCGCTCCCTCACTGCTGCTAATTCA
Internal bar code:TTGGGTTGAGATAGTCAAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:162
LEAP-Seq percent confirming:34.1431
LEAP-Seq n confirming:10218
LEAP-Seq n nonconfirming:19709
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GATAGATGGTTGCAAGGGGA
Suggested primer 2:TAGCTTGACGCACACACACA