Insertion junction: LMJ.RY0402.182247_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182247
Chromosome:chromosome 3
Location:8545816
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g201888 (1 of 2) IPR027414 - Glycosyl hydrolase family, N-terminal domain 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCATCAGAAATGCCAGGCACACGCAACA
Internal bar code:TGAGGACGAGTCGCCGGTGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:690
LEAP-Seq percent confirming:73.3725
LEAP-Seq n confirming:2626
LEAP-Seq n nonconfirming:953
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACCCAGCACATACCGC
Suggested primer 2:AACCTCGTACATTTCGTCGG