Insertion junction: LMJ.RY0402.182336_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.182336
Chromosome:chromosome 17
Location:867415
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g702451 HLM27 putative N-methyltransferase; (1 of 1) PTHR22884:SF348 - PROTEIN SET-25 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTAGCTGCCTGCGGCTGAAACACACAC
Internal bar code:TCGGTGACGAGAGATAACTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGTTTCCTGAACGATGT
Suggested primer 2:TATGGTAGCAGCAGTGGCAG