Insertion junction: LMJ.RY0402.182488_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.182488
Chromosome:chromosome 2
Location:5862722
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g111300 (1 of 5) PF13391 - HNH endonuclease (HNH_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCGCCTTAGCACCAGCCTTAGCATC
Internal bar code:GTTGTTATGTCCGCGGTGTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:99.2276
LEAP-Seq n confirming:3597
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAGGGAGTTCAACAAGC
Suggested primer 2:GCTTCAAGCCTTGCGTAATC