Insertion junction: LMJ.RY0402.182578_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182578
Chromosome:chromosome 7
Location:3860179
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g338800 CGL125 (1 of 4) PF04676 - Protein similar to CwfJ C-terminus 2 (CwfJ_C_2); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGAATAGCTGAGTTCAAGGAGGGGGTG
Internal bar code:GGCGCGTTCTGGCTTGGAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:85.6744
LEAP-Seq n confirming:3684
LEAP-Seq n nonconfirming:616
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAACATAGCAACCAACCG
Suggested primer 2:GCATGCTGGGCATTTAGTTT