Insertion junction: LMJ.RY0402.182608_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.182608
Chromosome:chromosome 4
Location:4083395
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g233302 (1 of 2) PTHR23132//PTHR23132:SF9 - D-ALANINE--D-ALANINE LIGASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACACTTCGTCGAAAACACGAGAACTTTG
Internal bar code:TAGGATTTAACACGTTCACAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:99.1801
LEAP-Seq n confirming:3871
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTGCCCTGCTGTATGA
Suggested primer 2:GAAGCTGAGGTTGTGCCTTC