Insertion junction: LMJ.RY0402.182623_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182623
Chromosome:chromosome 11
Location:2720639
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g477000 SNRK2D snRK1 family in Chlamydomonas, subgroup 2; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGGCGGGGTGCAGCCGTGCGTGCACGC
Internal bar code:GAGGTTATCACCCGTCGCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:512
LEAP-Seq percent confirming:58.2349
LEAP-Seq n confirming:16661
LEAP-Seq n nonconfirming:11949
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACAACCAACGAACACGA
Suggested primer 2:TGCGTGCTTAGGAGTTGATG