Insertion junction: LMJ.RY0402.182767_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.182767
Chromosome:chromosome 9
Location:5272470
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g399701 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGGTACAGCATGGCCAAGAAGCAGAGTT
Internal bar code:CACGCGACTAGACAGAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:853
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:697
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAAGTAAGTGCAGCCTTC
Suggested primer 2:GTGAAACACATTGGGTGCTG