Insertion junction: LMJ.RY0402.183050_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.183050
Chromosome:chromosome 8
Location:2176981
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g369600 MFT2,MAE2,MFT2 MATE efflux family protein; (1 of 1) IPR000104//IPR002528//IPR029303 - Antifreeze protein, type I // Multi antimicrobial extrusion protein // Polysaccharide biosynthesis protein, C-terminal domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGACGCCGCGTGACGGCATCACTAGC
Internal bar code:CGATTCAGCATGTTTGACGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:99.8643
LEAP-Seq n confirming:736
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGGACCCCTCTCTTACCTTC
Suggested primer 2:TTTGGGTTTTCCTGACCAAC