Insertion junction: LMJ.RY0402.183078_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.183078
Chromosome:chromosome 12
Location:3033879
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g500715 (1 of 5) 6.2.1.3 - Long-chain-fatty-acid--CoA ligase / Lignoceroyl-CoA synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCACGCACATGCACACACGCACACATG
Internal bar code:ATAGGGTTGTGTTCTCGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:52.8871
LEAP-Seq n confirming:1209
LEAP-Seq n nonconfirming:1077
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTGTGCCTCTCTTCCT
Suggested primer 2:GGAGGAGGAGGACGAGCTAC