Insertion junction: LMJ.RY0402.183128_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.183128
Chromosome:chromosome 10
Location:3917004
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre10.g448150 (1 of 6) PF01847 - von Hippel-Lindau disease tumour suppressor protein (VHL) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCGGCTGCCGCCACCGCCTGCGCAATG
Internal bar code:GTGGGAACTTGGACTTCGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:41.573
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCTGCCATTTGCCTTA
Suggested primer 2:AGTTACAATGACGCCCGAAC