Insertion junction: LMJ.RY0402.183348_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.183348
Chromosome:chromosome_3
Location:4168404
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre03.g173750 antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):GTTTCCGAATTGGCTTCCAGCTCCACGGGG
Internal bar code:GGGCATGTTTAGCCCGTACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:83.3766
LEAP-Seq n confirming:2247
LEAP-Seq n nonconfirming:448
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTAGAGAAGGAGCGGTGG
Suggested primer 2:AGCATGCACCTGCACCAC