Insertion junction: LMJ.RY0402.183551_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.183551
Chromosome:chromosome 17
Location:4928318
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g734548 PPD2 Pyruvate phosphate dikinase; (1 of 1) 2.7.11.32//2.7.9.1 - [Pyruvate, phosphate dikinase] kinase / Pyruvate, phosphate dikinase regulatory protein // Pyruvate, phosphate dikinase / Pyruvate,phosphate dikinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACACTATGTCAATGTGGATACTTCCCC
Internal bar code:AGCTTACGGGACGATTTTCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1190
LEAP-Seq percent confirming:99.5146
LEAP-Seq n confirming:1230
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGCTTGCACATTGAGA
Suggested primer 2:GCTGGTGTATGTGTGTTGGC