Insertion junction: LMJ.RY0402.183555_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.183555
Chromosome:chromosome 1
Location:2887398
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATCACGCAGGCAGGCAGCGTCTGCAGCG
Internal bar code:CTGCCCGGGTTGGTCAATTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1007
LEAP-Seq percent confirming:89.0312
LEAP-Seq n confirming:4659
LEAP-Seq n nonconfirming:574
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCCCAAGTCGTCCTCATC
Suggested primer 2:TTCTGCATGCTACGGTTCTG