Insertion junction: LMJ.RY0402.183632_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.183632
Chromosome:chromosome 3
Location:6378030
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g194100 MAPKKK3 (1 of 1) PF14381 - Ethylene-responsive protein kinase Le-CTR1 (EDR1); Mitogen-Activated Protein Kinase Kinase Kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCAAGCTGGCTGTGTTTGAGACTCTTG
Internal bar code:CCTGCAGAACGTTTGGCAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:99.6942
LEAP-Seq n confirming:15320
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACGTAGCTCTGGATCTC
Suggested primer 2:GCTCGAGTTTAGGCAGGTTG