Insertion junction: LMJ.RY0402.183632_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.183632
Chromosome:chromosome 3
Location:6378034
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g194100 MAPKKK3 (1 of 1) PF14381 - Ethylene-responsive protein kinase Le-CTR1 (EDR1); Mitogen-Activated Protein Kinase Kinase Kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCCATGGCTTCTAGACTACCACACACT
Internal bar code:CCCTCGTTCGTAATCGCAAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:98.7915
LEAP-Seq n confirming:654
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCGAGTTTAGGCAGGTTG
Suggested primer 2:GCACTAGGACCAACGTCCAT