Insertion junction: LMJ.RY0402.183674_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.183674
Chromosome:chromosome 6
Location:3164227
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g275500 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGAGCGAAGGCGGAGGCGGCGAGCTGC
Internal bar code:GCATGAAAACGAGCTTGCCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:99.6168
LEAP-Seq n confirming:9359
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCTTTCAAGCACGTCAA
Suggested primer 2:GCTACCCGGAGTGTTGATGT