Insertion junction: LMJ.RY0402.183733_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.183733
Chromosome:chromosome 12
Location:8380134
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g549050 STR1 Strictosidine synthase; (1 of 1) 4.3.3.2 - Strictosidine synthase / Strictosidine synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAGGTACCCACACACACACACACTTGG
Internal bar code:TTATGATGCGGGTCCGGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1051
LEAP-Seq percent confirming:96.7037
LEAP-Seq n confirming:7217
LEAP-Seq n nonconfirming:246
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGGGAGTGGAACACGAGG
Suggested primer 2:ACTCATTCACTCCCCATTGC