Insertion junction: LMJ.RY0402.183743_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.183743
Chromosome:chromosome 12
Location:1526749
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g487101 CSV9 Chlamydomonas-specific family protein; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGACCAGCTTTATTGCAAGCAGTCTT
Internal bar code:CAGTAGCGTGCGTGCCTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:71.0354
LEAP-Seq n confirming:542
LEAP-Seq n nonconfirming:221
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTTCCAAACGTTGATTG
Suggested primer 2:CGATGGCTCCTTCACCATAC