Insertion junction: LMJ.RY0402.183806_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.183806
Chromosome:chromosome 12
Location:5937960
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g534350 HCD2 (1 of 1) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD; 3-hydroxyacyl-CoA dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAGTGGGGGTGGCGCCGAGGTTGCACAC
Internal bar code:GAGTGCGGCGTCGATTCCCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:99.6446
LEAP-Seq n confirming:11776
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAACAGGCACTCGAAAAT
Suggested primer 2:GGTGAGCGGGTGTAGTAGGA