Insertion junction: LMJ.RY0402.184060_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.184060
Chromosome:chromosome 6
Location:2400329
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g268150 CNK3 NimA-related protein kinase; (1 of 4) PTHR24361//PTHR24361:SF411 - MITOGEN-ACTIVATED KINASE KINASE KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGCCATCTCGGCCTTCTGCTCCGCAAG
Internal bar code:GTGCCCGGGACGTTCCGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:34
LEAP-Seq percent confirming:67.5
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCAAGAACACACCGTTA
Suggested primer 2:CCTGCTTTGCATCAACTGAA