Insertion junction: LMJ.RY0402.184151_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184151
Chromosome:chromosome 3
Location:3724179
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g169550 AOX2 Alternative oxidase; (1 of 2) PTHR31803:SF3 - ALTERNATIVE OXIDASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTACTTCATCGGGTAAGCCGCGACGG
Internal bar code:AGTAGCTAAGGCGTTGCGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:953
LEAP-Seq percent confirming:90.523
LEAP-Seq n confirming:2025
LEAP-Seq n nonconfirming:212
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGACCGAGGCTAAATGG
Suggested primer 2:GTAGCGGACATCTGTGGGAT