Insertion junction: LMJ.RY0402.184338_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184338
Chromosome:chromosome 1
Location:2141250
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g011630 (1 of 1) IPR001283//IPR002413//IPR003882//IPR014044 - Cysteine-rich secretory protein, allergen V5/Tpx-1-related // Ves allergen // Pistil-specific extensin-like protein // CAP domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGAATAAACAGTCCCAGTACAAGACAC
Internal bar code:GGTTGATGTTGGTACATCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1016
LEAP-Seq percent confirming:96.8121
LEAP-Seq n confirming:577
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCTGCGTAATATCCA
Suggested primer 2:GTGCCGTAACCACTAGCCAT