Insertion junction: LMJ.RY0402.184345_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.184345
Chromosome:chromosome 3
Location:4816216
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g178700 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATGGCGGAGGCGGCTGGGAGTGGGTAT
Internal bar code:AGTTTGGTTTTTCGCCGCATAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:99.0356
LEAP-Seq n confirming:7394
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGGATCCCAACTCTGTTA
Suggested primer 2:TCGCAGGAGGTCTAAGTCGT