Insertion junction: LMJ.RY0402.184410_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184410
Chromosome:chromosome 9
Location:6074957
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g403219 RPB5 DNA-directed RNA polymerase II, 23 kDa polypeptide; (1 of 1) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGACAGCATAGCGCCTCAGCCTGCAAA
Internal bar code:GCGCGGGCAGGGTAAGTGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:588
LEAP-Seq percent confirming:99.529
LEAP-Seq n confirming:3381
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTACAGTGCAGGAAGG
Suggested primer 2:AAGGCGGTTAAATGCATGAC