Insertion junction: LMJ.RY0402.184532_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184532
Chromosome:chromosome 3
Location:6299340
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGAATTTTACACAGTCTGGTCCGCCTT
Internal bar code:GGGGGGGCTAGAATCAGCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:91.4992
LEAP-Seq n confirming:592
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCGAGCACAACTATGTTA
Suggested primer 2:CTACATCCTCGGCTGGAGTC