Insertion junction: LMJ.RY0402.184532_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184532
Chromosome:chromosome 6
Location:7525146
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g300600 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACATCACCAATGCAAGTGGCATGGATGT
Internal bar code:GTTCGCCATGAGGGGCTCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:91.4604
LEAP-Seq n confirming:2549
LEAP-Seq n nonconfirming:238
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AATGGCATGGACTGACACAA
Suggested primer 2:GACTGAACGGCTGTAGCCTC