Insertion junction: LMJ.RY0402.184547_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184547
Chromosome:chromosome 6
Location:2414361
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g268300 HTA9 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCTTGCCCTAGCCAACCCCCACACCCA
Internal bar code:CAGAAATGCGACGAGGAGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:37.9002
LEAP-Seq n confirming:509
LEAP-Seq n nonconfirming:834
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGAGCGAACGTGAAAG
Suggested primer 2:CTTGGCAGTCTTCTTGGAGG