Insertion junction: LMJ.RY0402.184590_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.184590
Chromosome:chromosome 3
Location:4933008
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g179860 (1 of 1) 2.1.1.203 - tRNA (cytosine(34)-C(5))-methyltransferase; tRNA-(m5C) methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCAAACCCGTCAGGCGAAGTCTTTTATA
Internal bar code:GAGTTACAAAGTGCACTGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:77.9817
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGTGTGATGGCCTGATG
Suggested primer 2:CTCGCTTCAGACATTAGCCC