Insertion junction: LMJ.RY0402.184853_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.184853
Chromosome:chromosome 1
Location:6680407
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g048000 TPM1 Tropomyosin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTACCTGTCGCCGCACACGGTGACGCC
Internal bar code:GTCGAGGCATTGCTCCGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:63.0435
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGTGTCTTCCCTCAAC
Suggested primer 2:AAAGGAGAAAGGCACAGCAA