Insertion junction: LMJ.RY0402.184971_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.184971
Chromosome:chromosome 12
Location:2108691
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCTTGTGCCTTCCAAGGCCGGTGGCCC
Internal bar code:CTATTGGGTCCGGCGCTCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:57.628
LEAP-Seq n confirming:1137
LEAP-Seq n nonconfirming:836
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTTGTGTCCTTCACCT
Suggested primer 2:GCTGGTAGGACGTGGGTAAA