Insertion junction: LMJ.RY0402.184988_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.184988
Chromosome:chromosome 6
Location:4361069
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278267 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGTCATTGATTTGCAGTAGGCGTCGGGC
Internal bar code:CATGCGCTTTTAGAATCGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:96.8487
LEAP-Seq n confirming:922
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTATGCTTTGTTCATGCG
Suggested primer 2:CCCTCCCTCATCAGCATTTA