Insertion junction: LMJ.RY0402.185101_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.185101
Chromosome:chromosome 7
Location:3016095
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g333400 MMP23 Matrix metalloproteinase; (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGATGCCGCGGAGTGCGTGCTGCGGTGT
Internal bar code:GTGAGTTCGGGGAAGCAGGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:806
LEAP-Seq percent confirming:96.7195
LEAP-Seq n confirming:855
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGAATGGGGCAGAAACACAC
Suggested primer 2:CCAACAGCACACCCACTATG