Insertion junction: LMJ.RY0402.185266_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185266
Chromosome:chromosome 6
Location:3977090
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278194 FAP236 (1 of 3) PF05217 - STOP protein (STOP); Flagellar Associated Protein 236 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAGCCGATAGTGGTTGTGGGTTTCCA
Internal bar code:GCGCCTCCGCTTTGTGGGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:264
LEAP-Seq percent confirming:68.2819
LEAP-Seq n confirming:155
LEAP-Seq n nonconfirming:72
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACCTGGTTGACGGATA
Suggested primer 2:AATAGCACCTGTCCACCCTG