Insertion junction: LMJ.RY0402.185279_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185279
Chromosome:chromosome 14
Location:2954854
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g627750 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCCTCCGCAGTCCGCACTCCGGACTC
Internal bar code:CCCGTCCGCCACAGTGAGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:887
LEAP-Seq percent confirming:99.5465
LEAP-Seq n confirming:878
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGCGAGAGGTTTGGAGA
Suggested primer 2:TGGCGTACATGAAGCTGAAG