Insertion junction: LMJ.RY0402.185324_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.185324
Chromosome:chromosome 17
Location:4822353
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g733950 CGL152 (1 of 90) PF03372 - Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos); Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGAGGTGAGGGCCCGGGGAGGGGTTCCAG
Internal bar code:GTGACTATGGGCCCACATGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:281
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTAACTTGGCTGCACGA
Suggested primer 2:GCGAGTTTGAGGAGATCTGG