Insertion junction: LMJ.RY0402.185422_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.185422
Chromosome:chromosome 3
Location:7434454
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205850 MAE6,MFT6 MATE efflux family protein; (1 of 3) PTHR11206//PTHR11206:SF95 - MULTIDRUG RESISTANCE PROTEIN // MULTI ANTIMICROBIAL EXTRUSION FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACAAGATGAACACTGATGAACACGACAG
Internal bar code:TCTTTAAACCGTAGAAGCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:390
LEAP-Seq percent confirming:98.1259
LEAP-Seq n confirming:5393
LEAP-Seq n nonconfirming:103
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAGCTCACATATTGGAT
Suggested primer 2:GCAACCTCTGGCAAGACTTC