Insertion junction: LMJ.RY0402.185804_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.185804
Chromosome:chromosome 3
Location:5835729
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g189200 (1 of 1) PTHR13192//PTHR13192:SF3 - MY011 PROTEIN // METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE D PROTEIN, MITOCHONDRIAL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTGCGGGGCCCATTGCCCCGCGTGCCGA
Internal bar code:CGTGTCGTTTTATCGTGGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:99.5169
LEAP-Seq n confirming:1030
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTGGTGTTGAGGAGGTG
Suggested primer 2:ACTCCACGCCAATGGTAGAC