Insertion junction: LMJ.RY0402.185819_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.185819
Chromosome:chromosome 11
Location:139874
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre11.g467541 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGACTCCACCACCCCTGCACGCACTC
Internal bar code:ATATGGGAGTGTGGCCCGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:278
LEAP-Seq percent confirming:89.1667
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCAGGAAGAGATGTCG
Suggested primer 2:TGGTATGCTTTGTCTGCGAG