Insertion junction: LMJ.RY0402.185835_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185835
Chromosome:chromosome 9
Location:2975551
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g387700 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAACCGACCCCATTTCGCTTGTGCGA
Internal bar code:GGAACCAAAGACGCGAGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:375
LEAP-Seq percent confirming:60.0091
LEAP-Seq n confirming:2632
LEAP-Seq n nonconfirming:1754
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGTACGTTGGAGCTGA
Suggested primer 2:ACTGGTGGGCTTAGATGGTG