Insertion junction: LMJ.RY0402.186076_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.186076
Chromosome:chromosome 1
Location:6456830
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g045850 (1 of 1) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAGAAGCAGCAGTGCCAGCTGGGACCCG
Internal bar code:ATCAACCAGGCCTAAAGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:94.9495
LEAP-Seq n confirming:94
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGCCACAGACGTTGTCAG
Suggested primer 2:TGCCAGTGAGCAGCTAGAGA