Insertion junction: LMJ.RY0402.186152_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.186152
Chromosome:chromosome 2
Location:5079552
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g104800 HTV1 (1 of 35) IPR000164//IPR007125//IPR009072 - Histone H3/CENP-A // Histone H2A/H2B/H3 // Histone-fold; Histone H3 variant 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCCCAGCCTCGCTCTGTGCCGTCTTCA
Internal bar code:GTGAGGCCGGCGGCCGGACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:96.3749
LEAP-Seq n confirming:1090
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCTGTGAGACTGCTGC
Suggested primer 2:CTCACACGGTTGACAGTTGG