Insertion junction: LMJ.RY0402.186240_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.186240
Chromosome:chromosome 9
Location:4529891
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g396065 ALK5 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAGGTGATTAGCCGCATTACTCAACTC
Internal bar code:TTGCTAACTGTGGCTTGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:601
LEAP-Seq percent confirming:97.5054
LEAP-Seq n confirming:899
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAAATGTCCTGTCCCTCGTT
Suggested primer 2:CCATACGCTTGCTGTTGAGA