Insertion junction: LMJ.RY0402.186394_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.186394
Chromosome:chromosome 4
Location:1250336
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTAGAGCGCACGTGCAAGTGCGTGAGAC
Internal bar code:CATCGCTACGCGTTGGATACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:99
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:246
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGGAAGAGAGTTGTTTG
Suggested primer 2:GGCAGTCGTAGATGCAGTGA