Insertion junction: LMJ.RY0402.186580_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.186580
Chromosome:chromosome 3
Location:3852282
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g170800 (1 of 1) PTHR12231//PTHR12231:SF138 - CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACGGGTACACCGCAGTAATAAAGGGAG
Internal bar code:AGGTGGTATCTCCTTCTCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:98.8546
LEAP-Seq n confirming:1122
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAATACGGTACCGCACGACT
Suggested primer 2:TTTCCAAGGTGTTTGGCTTC